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Addendum: Accurate structure prediction of biomolecular interactions with AlphaFold 3 | Nature
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Download PDF Addendum Open access Published: 27 November 2024 Addendum: Accurate structure prediction of biomolecular interactions with AlphaFold 3 Josh Abramson, Jonas Adler, Jack Dunger, Richard Evans, Tim Green, Alexander Pritzel, Olaf Ronneberger, Lindsay Willmore, Andrew J. Ballard, Joshua Bambrick, Sebastian W. Bodenstein, David A. Evans, Chia-Chun Hung, Michael O’Neill, David Reiman, Kathryn Tunyasuvunakool, Zachary Wu, Akvilė Žemgulytė, Eirini Arvaniti, Charles Beattie, Ottavia Bertolli, Alex Bridgland, Alexey Cherepanov, Miles Congreve, …John M. Jumper Show authors
Nature volume 636, page E4 (2024) Cite this article
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The Original Article was published on 08 May 2024
Addendum to: Nature https://doi.org/10.1038/s41586-024-07487-w Published online 8 May 2024
In our original article, we provided an extensive description in the Supplementary Information of pseudocode underlying the functioning of our AlphaFold3 model, which allows prediction of the structure of complexes including proteins, nucleic acids, small molecules, ions and modified residues. Accompanying release of the paper we provided free non-commercial access to the AlphaFold3 server (https://alphafoldserver.com/welcome). Google DeepMind has now released the underlying inference code, which can be accessed here: https://github.com/google-deepmind/alphafold3.
Author information Author notes
These authors contributed equally: Josh Abramson, Jonas Adler, Jack Dunger, Richard Evans, Tim Green, Alexander Pritzel, Olaf Ronneberger, Lindsay Willmore
These authors jointly supervised this work: Victor Bapst, Pushmeet Kohli, Max Jaderberg, Demis Hassabis, John M. Jumper
Authors and Affiliations
Core Contributor, Google DeepMind, London, UK
Josh Abramson, Jonas Adler, Jack Dunger, Richard Evans, Tim Green, Alexander Pritzel, Olaf Ronneberger, Lindsay Willmore, Andrew J. Ballard, Sebastian W. Bodenstein, David A. Evans, Michael O’Neill, David Reiman, Kathryn Tunyasuvunakool, Zachary Wu, Akvilė Žemgulytė, Victor Bapst, Pushmeet Kohli, Demis Hassabis & John M. Jumper
Core Contributor, Isomorphic Labs, London, UK
Joshua Bambrick, Chia-Chun Hung, Max Jaderberg & Demis Hassabis
Google DeepMind, London, UK
Eirini Arvaniti, Charles Beattie, Ottavia Bertolli, Alex Bridgland, Alexander I. Cowen-Rivers, Andrew Cowie, Michael Figurnov, Fabian B. Fuchs, Hannah Gladman, Rishub Jain, Yousuf A. Khan, Kuba Perlin, Anna Potapenko, Sukhdeep Singh, Ashok Thillaisundaram, Ellen D. Zhong, Michal Zielinski & Augustin Žídek
Isomorphic Labs, London, UK
Alexey Cherepanov, Miles Congreve, Caroline M. R. Low, Pascal Savy, Adrian Stecula, Catherine Tong & Sergei Yakneen
Department of Molecular and Cellular Physiology, Stanford University, Stanford, CA, USA
Yousuf A. Khan
Department of Computer Science, Princeton University, Princeton, NJ, USA
Ellen D. Zhong
Corresponding authors
Correspondence to Max Jaderberg, Demis Hassabis or John M. Jumper.
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Abramson, J., Adler, J., Dunger, J. et al. Addendum: Accurate structure prediction of biomolecular interactions with AlphaFold 3. Nature 636, E4 (2024). https://doi.org/10.1038/s41586-024-08416-7
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Published 27 November 2024
Version of record 27 November 2024
Issue date 12 December 2024
DOI https://doi.org/10.1038/s41586-024-08416-7
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